Installation

External dependencies

The following external software is used by ETSimulations and should thus be installed first:

• Chimera - https://www.cgl.ucsf.edu/chimera/ (Only needed if you wish to simulate data sets)

• TEM-simulator - http://tem-simulator.sourceforge.net/ (Only needed if you wish to simulate data sets)

• Python 3.3 or greater

• Corresponding softwares for the various Processors (i.e. EMAN2 for the EMAN2 Processor) that you wish to run

Setting up ETSimulations

To begin, navigate to a directory in which you want to install the package and run the following commands:

git clone https://github.com/kmshin1397/ETSimulations.git

cd ETSimulations

python3 -m venv env

source env/bin/activate

pip install -r requirements.txt

This will have downloaded the ETSimulations code and set up the necessary Python packages and environment.